posMatrix: Generate cell position matrix in a given region based on...
In huqiwen0313/snarePip: snarePip
posMatrix R Documentation
Generate cell position matrix in a given region based on middle position of a fragment
Description
Generate cell position matrix in a given region based on middle position of a fragment
Usage
posMatrix(obj, region, cells = NULL, fragments = NULL)
Arguments
obj
an R object (default:pagoda2)
region
regions of interest (GRanges object)
cells
which cell to include. Default: all cells in the object
huqiwen0313/snarePip documentation built on June 11, 2022, 5:34 p.m.
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| posMatrix | R Documentation |
Generate cell position matrix in a given region based on middle position of a fragment
Description
Generate cell position matrix in a given region based on middle position of a fragment
Usage
posMatrix(obj, region, cells = NULL, fragments = NULL)
Arguments
obj |
an R object (default:pagoda2) |
region |
regions of interest (GRanges object) |
cells |
which cell to include. Default: all cells in the object |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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