devCNA.txt: CNA data.

Description Format Source Examples

Description

A file containing TCAG OV carcinoma CNAs for 16 genes.

Format

A tab separated text file with 16 rows and 582 columns, most of which represent individual cancer tissue samples:

Gene Symbol

HGNC gene symbol

Locus ID

Entrez Gene ID

Cytoband

Chromosome, arm and band information

<Sample Barcode>...

497 tissue sample barcodes

...

Source

https://tcga-data.nci.nih.gov/docs/publications/ov_2011/

Examples

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## Not run: 
system.file("extdata", "devCNA.txt", package="rete")
fPath <- system.file("extdata", "devCNA.txt", package="rete")
myCNA <- read.delim(fPath, stringsAsFactors = FALSE)

## End(Not run)

hyginn/ekplektoR documentation built on May 17, 2017, 12:08 a.m.