devSNV.maf: SNV data.

Description Format Source Examples

Description

A MAF formattted file containing TCAG OV carcinoma SNVs for 16 genes.

Format

A MAF formatted file with 15 rows and 32 columns:

HUGO_Symbol

HGNC gene symbol

ENTREZ_GENE_ID

ID

...

Source

https://tcga-data.nci.nih.gov/docs/publications/ov_2011/

Examples

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## Not run: 
system.file("extdata", "devSNV.maf", package="rete")
fPath <- system.file("extdata", "devSNV.maf", package="rete")
myMAF <- read.delim(fPath, skip = 1, stringsAsFactors = FALSE)

## End(Not run)

hyginn/ekplektoR documentation built on May 17, 2017, 12:08 a.m.