Files in imminfo/tcr
Advanced Data Analysis of Immune Receptor Repertoires

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/RcppExports.R R/crosses.R R/dataproc.R R/datatools.R R/diversity.R R/docdata.R R/filters.R R/graph.R R/infoanalysis.R R/io.R R/kmers.R R/measures.R R/mitcr.R R/onload.R R/parsing.R R/plots.R R/repdiversity.R R/repoverlap.R R/segments.R R/shared.R R/spectrum.R R/stats.R R/strtools.R README.md
data/beta.prob.rda
data/genesegments.rda
data/twa.rda
data/twb.rda
inst/CITATION
inst/crossanalysis.report.Rmd inst/library.report.Rmd man/AA_TABLE.Rd man/apply.symm.Rd man/assymetry.Rd man/barcodes.to.reads.Rd man/beta.prob.Rd man/bootstrap.tcr.Rd man/check.distribution.Rd man/clonal.space.homeostasis.Rd man/cloneset.stats.Rd man/codon.variants.Rd man/column.summary.Rd man/contamination.stats.Rd man/convergence.index.Rd man/cosine.sharing.Rd man/cosine.similarity.Rd man/entropy.Rd man/entropy.seg.Rd man/find.clonotypes.Rd man/find.similar.sequences.Rd man/fix.alleles.Rd man/gc.content.Rd man/geneUsage.Rd man/generate.kmers.Rd man/generate.tcr.Rd man/get.all.substrings.Rd man/get.deletions.alpha.Rd man/get.inframes.Rd man/get.kmers.Rd man/gibbs.sampler.Rd man/group.clonotypes.Rd man/has.class.Rd man/intersectClonesets.Rd man/inverse.simpson.Rd man/kmer.profile.Rd man/kmer.table.Rd man/loglikelihood.Rd man/matrixSubgroups.Rd man/matrixdiagcopy.Rd man/mutated.neighbours.Rd man/mutation.network.Rd man/ozScore.Rd man/parse.cloneset.Rd man/parse.folder.Rd man/pca.segments.Rd man/pca2euclid.Rd man/permutDistTest.Rd man/permutedf.Rd man/rarefaction.Rd man/repDiversity.Rd man/repLoad.Rd man/repOverlap.Rd man/repSave.Rd man/resample.Rd man/revcomp.Rd man/reverse.string.Rd man/sample.clones.Rd man/sample2D.Rd man/segments.alphabets.Rd man/segments.list.Rd man/set.group.vector.Rd man/set.pb.Rd man/set.people.vector.Rd man/set.rank.Rd man/shared.repertoire.Rd man/spectratype.Rd man/startmitcr.Rd man/tailbound.proportion.Rd man/top.cross.Rd man/top.fun.Rd man/twinsdata.Rd man/vis.clonal.dynamics.Rd man/vis.clonal.space.Rd man/vis.count.len.Rd man/vis.gene.usage.Rd man/vis.group.boxplot.Rd man/vis.heatmap.Rd man/vis.kmer.histogram.Rd man/vis.logo.Rd man/vis.number.count.Rd man/vis.pca.Rd man/vis.radarlike.Rd man/vis.rarefaction.Rd man/vis.shared.clonotypes.Rd man/vis.top.proportions.Rd
src/Makevars
src/RcppExports.cpp
src/neighbour.search.cpp
tcR.Rproj
vignettes/tcrvignette.Rmd
imminfo/tcr documentation built on July 27, 2018, 4:05 a.m.