Files in irilenia/baerhunter
Detection and Analysis of Expressed Intergenic Elements in Bacterial RNA-seq Data
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/count_features.R
R/differential_expression.R
R/feature_file_editor.R
R/tpm_norm_flagging.R
README.md
baerhunter.Rproj
inst/extdata/ERR262980_1_10000.bam
inst/extdata/ERR262980_1_10000.bam.bai
inst/extdata/ERR262982_1_10000.bam
inst/extdata/ERR262982_1_10000.bam.bai
inst/extdata/ERR262983_1_10000.bam
inst/extdata/ERR262983_1_10000.bam.bai
inst/extdata/ERR262984_1_10000.bam
inst/extdata/ERR262984_1_10000.bam.bai
inst/extdata/ERR262987_1_10000.bam
inst/extdata/ERR262987_1_10000.bam.bai
inst/extdata/ERR262988_1_10000.bam
inst/extdata/ERR262988_1_10000.bam.bai
inst/extdata/Mycobacterium_tuberculosis_h37rv.ASM19595v2.40.chromosome.Chromosome.gff3
inst/extdata/chromosome.txt
inst/extdata/conditions.txt
man/UTR_calc.Rd
man/count_features.Rd
man/differential_expression.Rd
man/feature_file_editor.Rd
man/find_strandedness.Rd
man/major_features.Rd
man/make_saf.Rd
man/peak_analysis.Rd
man/peak_union_calc.Rd
man/read_annotation_file.Rd
man/sRNA_calc.Rd
man/strand_feature_editor.Rd
man/tpm_flag_filtering.Rd
man/tpm_flagging.Rd
man/tpm_normalisation.Rd
vignettes/.gitignore
vignettes/baerhunter.Rmd
