In isglobal-brge/dsOmicsClient: DataSHIELD client site Omics association functions.
Genomic data can be stored in different formats. PLINK and VCF files are commonly used in genetic epidemiology studies. We have a GWAS example available at BRGE data repository that aims to find SNPs associated with asthma. We have data stored in VCF (brge.vcf) with several covariates and phenotypes available in the file brge.txt (gender, age, obesity, smoking, country and asthma status). The same data is also available in PLINK format (brge.bed, brge.bim, brge.fam) with covariates in the file brge.phe.
isglobal-brge/dsOmicsClient documentation built on March 20, 2023, 3:52 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Genomic data can be stored in different formats. PLINK and VCF files are commonly used in genetic epidemiology studies. We have a GWAS example available at BRGE data repository that aims to find SNPs associated with asthma. We have data stored in VCF (brge.vcf) with several covariates and phenotypes available in the file brge.txt (gender, age, obesity, smoking, country and asthma status). The same data is also available in PLINK format (brge.bed, brge.bim, brge.fam) with covariates in the file brge.phe.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.