plot_depmap_dependency: Plot gene dependency information from DepMap CRISPR and RNAi...

In j-andrews7/CRISPRball: Shiny Application for Interactive CRISPR Screen Visualization, Exploration, Comparison, and Filtering

Plot gene dependency information from DepMap CRISPR and RNAi tables

Description

Plot gene dependency information from DepMap CRISPR and RNAi tables

Usage

plot_depmap_dependency(
  df,
  crispr.color = "#3584B5",
  rnai.color = "#52288E",
  depline = TRUE,
  plot.grid = FALSE
)

Arguments

df	data.frame containing information for a single gene as returned by get_depmap_plot_data.
crispr.color	Character scalar for CRISPR trace color as hexcode.
rnai.color	Character scalar for RNAi trace color as hexcode.
depline	Boolean indicating whether to show the dependency threshold line.
plot.grid	Boolean indicating whether to plot gridlines.

Value

plotly object

Author(s)

Jared Andrews

See Also

get_depmap_plot_data

Examples

library(CRISPRball)
data(depmap_22q1_crispr_rnai)
plot_depmap_dependency(depmap_22q1_crispr_rnai)

j-andrews7/CRISPRball documentation built on Nov. 30, 2023, 7:34 p.m.