jackgisby/packFinder: de novo Annotation of Pack-TYPE Transposable Elements
Algorithm and tools for in silico pack-TYPE transposon discovery. Filters a given genome for properties unique to DNA transposons and provides tools for the investigation of returned matches. Sequences are input in DNAString format, and ranges are returned as a dataframe (in the format returned by as.dataframe(GRanges)).
Getting started
Browse package contents
Package details |
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| Bioconductor views | Annotation Genetics SequenceMatching |
| Maintainer | |
| License | GPL-2 |
| Version | 1.9.3 |
| URL | https://github.com/jackgisby/packFinder |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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