p_a: Function that gives the probability of observing Ct value x...

In jameshay218/virosolver: Infer epidemic dynamics using viral load data

Function that gives the probability of observing Ct value x given age (days after infection) a and the viral kinetics curve.

Description

This is the Gumbel probability density function normalized to the observable values.

Usage

p_a(x, a, pars, viral_loads, sd_mod)

Arguments

x	Observed Ct value.
a	Days after infection.
pars	Model parameters.
viral_loads	Observed viral loads.
sd_mod	Standard deviation of the viral kinetics curve.

Value

Returns a vector of probabilities.

Author(s)

James Hay, [e-mail]

See Also

Other likelihood functions: likelihood_R(), likelihood_cpp_wrapper(), likelihood_detectable(), likelihood_pos_R(), prob_detectable_curve(), prop_detectable_single(), prop_detectable()

jameshay218/virosolver documentation built on April 17, 2025, 2:57 p.m.