solveSEEIRRModel_rlsoda_wrapper: Wrapper function for the solveSEIRRModel_rlsoda code, which...

In jameshay218/virosolver: Infer epidemic dynamics using viral load data

Wrapper function for the solveSEIRRModel_rlsoda code, which is written in C.

Description

This function returns a vector of incidence values for given times according to SEIRR model parameters. It utilizes rlsoda, a solver for ordinary differential equations but is not available on CRAN.

Usage

solveSEEIRRModel_rlsoda_wrapper(pars, times)

Arguments

pars	Vector of labeled SEEIRR model parameters.
times	Time points for incidence calculation.

Value

Returns incidence values for given points in time.

Author(s)

James Hay, [e-mail]

See Also

Other incidence functions: SEEIRRModel(), detectable_SEEIRRModel(), detectable_SEIRModel(), exponential_growth_model(), gaussian_process_model(), reverse_gp_model(), solveSEEIRRModel_rlsoda(), solveSEIRModel_lsoda_wrapper(), solveSEIRModel_lsoda(), solveSEIRModel_rlsoda_wrapper(), solveSEIRModel_rlsoda(), solveSEIRswitch_rlsoda_wrapper(), solveSEIRswitch_rlsoda()

Examples

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jameshay218/virosolver documentation built on April 17, 2025, 2:57 p.m.