API for jaspershen/MSannotator
xMSannotator: R package for network based annotation of metabolomics data.
| Global functions | |
|---|---|
| AnnotationbyMonoIsotopicMass | Source code |
| Annotationbychemical_IDs | Source code |
| Annotationbychemical_IDschild | Source code |
| ChemSpider.annotation | Man page Source code |
| HMDB.Annotation | Man page Source code |
| KEGG.Annotation | Man page Source code |
| KEGG.annotationvold | Source code |
| LipidMaps.Annotation | Man page Source code |
| Metlin.annotation | Source code |
| T3DB.Annotation | Man page Source code |
| check_element | Source code |
| check_element2 | Source code |
| check_golden_rules | Source code |
| check_golden_rules2 | Source code |
| chspider.batch.annotation.child | Source code |
| compare_intensities_cortest | Source code |
| data_preprocess | Source code |
| doWGCNA | Source code |
| do_eval | Source code |
| do_minmax | Source code |
| docortest | Source code |
| feat.batch.annotation.child | Source code |
| find.Overlapping.mzs | Source code |
| find.Unique.mzs | Source code |
| getCorchild | Source code |
| getSumreplicates | Source code |
| getSumreplicateschild | Source code |
| getVenn | Source code |
| getVennv2 | Source code |
| get_allinf | Man page Source code |
| get_brite_res | Man page Source code |
| get_chemscorev1.6.71 | Source code |
| get_confidence_stage2 | Source code |
| get_confidence_stage2.1 | Source code |
| get_confidence_stage4 | Source code |
| get_confidence_stage4v1.5.6 | Source code |
| get_kegg_map | Man page Source code |
| get_mz_by_KEGGcompoundIDs | Man page Source code |
| get_mz_by_KEGGdrugIDs | Source code |
| get_mz_by_KEGGpathwayIDs | Man page Source code |
| get_mz_by_KEGGspecies | Man page Source code |
| get_mz_by_monoisotopicmass | Man page Source code |
| get_peak_blocks_cor | Source code |
| get_peak_blocks_graph | Source code |
| get_peak_blocks_hclust | Source code |
| get_peak_blocks_modules | Source code |
| get_peak_blocks_modulesvhclust | Source code |
| getscore | Source code |
| group_by_MDF | Source code |
| group_by_isotopes_v4 | Source code |
| group_by_isotopes_vsplit | Source code |
| group_by_massdefect | Source code |
| group_by_massdefect_v4 | Source code |
| group_by_massdefectv2 | Source code |
| group_by_massdefectv3 | Source code |
| group_by_rt | Source code |
| group_by_rt_density | Source code |
| group_by_rt_hist | Source code |
| group_bymassdefect_old | Source code |
| group_bymzisotopes | Source code |
| group_bymzisotopes1 | Source code |
| group_bymzisotopes3 | Source code |
| group_metabs_prev | Source code |
| multilevelannotation | Man page Source code |
| multilevelannotationstep2 | Source code |
| multilevelannotationstep3 | Source code |
| multilevelannotationstep4 | Source code |
| multilevelannotationstep5 | Source code |
| simpleAnnotation | Source code |
| xMSannotator | Man page |
| xMSannotator_1.1.1-package | Man page |
