Files in jaspershen/MSannotator

xMSannotator: R package for network based annotation of metabolomics data.

.gitignore

DESCRIPTION

MSannotator.Rproj

NAMESPACE

R/AnnotationbyMonoIsotopicMass.R R/Annotationbychemical_IDs.R R/Annotationbychemical_IDschild.R R/ChemSpider.annotation.R R/HMDB.Annotation.R R/KEGG.Annotation.R R/KEGG.annotationvold.R R/LipidMaps.Annotation.R R/Metlin.annotation.R R/T3DB.Annotation.R R/check_element.R R/check_element2.R R/check_golden_rules.R R/check_golden_rules2.R R/chspider.batch.annotation.child.R R/compare_intensities_cortest.R R/data_preprocess.R R/doWGCNA.R R/do_eval.R R/do_minmax.R R/docortest.R R/feat.batch.annotation.child.R R/find.Overlapping.mzs.R R/find.Unique.mzs.R R/getCorchild.R R/getSumreplicates.R R/getSumreplicateschild.R R/getVenn.R R/getVennv2.R R/get_allinf.R R/get_brite_res.R R/get_chemscorev1.6.71.R R/get_confidence_stage2.1.R R/get_confidence_stage2.R R/get_confidence_stage4.R R/get_confidence_stage4v1.5.6.R R/get_kegg_map.R R/get_mz_by_KEGGcompoundIDs.R R/get_mz_by_KEGGdrugIDs.R R/get_mz_by_KEGGpathwayIDs.R R/get_mz_by_KEGGspecies.R R/get_mz_by_monoisotopicmass.R R/get_peak_blocks_cor.R R/get_peak_blocks_graph.R R/get_peak_blocks_hclust.R R/get_peak_blocks_modules.R R/get_peak_blocks_modulesvhclust.R R/getscore.R R/group_by_MDF.R R/group_by_isotopes_v4.R R/group_by_isotopes_vsplit.R R/group_by_massdefect.R R/group_by_massdefect_v4.R R/group_by_massdefectv2.R R/group_by_massdefectv3.R R/group_by_rt.R R/group_by_rt_density.R R/group_by_rt_hist.R R/group_bymassdefect_old.R R/group_bymzisotopes.R R/group_bymzisotopes1.R R/group_bymzisotopes3.R R/group_metabs_prev.R R/moduleEigengenes2.R R/multilevelannotation.R R/multilevelannotationstep2.R R/multilevelannotationstep3.R R/multilevelannotationstep4.R R/multilevelannotationstep5.R R/simpleAnnotation.R

data/adduct_table.rda

data/adduct_weights.rda

data/customDB.rda

data/customIDs.rda

data/datalist

data/example_data.rda

data/hmdbAllinf.rda

data/hmdbCompMZ.rda

data/keggCompMZ.rda

data/keggotherinf.rda

data/lipidmapsCompMZ.rda

data/t3dbCompMZ.rda

data/t3dbotherinf.rda

man/ChemSpider.annotation.Rd man/HMDB.Annotation.Rd man/KEGG.Annotation.Rd man/LipidMaps.Annotation.Rd man/T3DB.Annotation.Rd man/get_allinf.Rd man/get_brite_res.Rd man/get_kegg_map.Rd man/get_mz_by_KEGGcompoundIDs.Rd man/get_mz_by_KEGGpathwayIDs.Rd man/get_mz_by_KEGGspecies.Rd man/get_mz_by_monoisotopicmass.Rd man/multilevelannotation.Rd man/xMSannotator_1.1.1-package.Rd

jaspershen/MSannotator documentation built on May 18, 2019, 5:55 p.m.