API for jaspershen/MSannotator
xMSannotator: R package for network based annotation of metabolomics data.

Global functions
AnnotationbyMonoIsotopicMass Source code
Annotationbychemical_IDs Source code
Annotationbychemical_IDschild Source code
ChemSpider.annotation Man page Source code
HMDB.Annotation Man page Source code
KEGG.Annotation Man page Source code
KEGG.annotationvold Source code
LipidMaps.Annotation Man page Source code
Metlin.annotation Source code
T3DB.Annotation Man page Source code
check_element Source code
check_element2 Source code
check_golden_rules Source code
check_golden_rules2 Source code
chspider.batch.annotation.child Source code
compare_intensities_cortest Source code
data_preprocess Source code
doWGCNA Source code
do_eval Source code
do_minmax Source code
docortest Source code
feat.batch.annotation.child Source code
find.Overlapping.mzs Source code
find.Unique.mzs Source code
getCorchild Source code
getSumreplicates Source code
getSumreplicateschild Source code
getVenn Source code
getVennv2 Source code
get_allinf Man page Source code
get_brite_res Man page Source code
get_chemscorev1.6.71 Source code
get_confidence_stage2 Source code
get_confidence_stage2.1 Source code
get_confidence_stage4 Source code
get_confidence_stage4v1.5.6 Source code
get_kegg_map Man page Source code
get_mz_by_KEGGcompoundIDs Man page Source code
get_mz_by_KEGGdrugIDs Source code
get_mz_by_KEGGpathwayIDs Man page Source code
get_mz_by_KEGGspecies Man page Source code
get_mz_by_monoisotopicmass Man page Source code
get_peak_blocks_cor Source code
get_peak_blocks_graph Source code
get_peak_blocks_hclust Source code
get_peak_blocks_modules Source code
get_peak_blocks_modulesvhclust Source code
getscore Source code
group_by_MDF Source code
group_by_isotopes_v4 Source code
group_by_isotopes_vsplit Source code
group_by_massdefect Source code
group_by_massdefect_v4 Source code
group_by_massdefectv2 Source code
group_by_massdefectv3 Source code
group_by_rt Source code
group_by_rt_density Source code
group_by_rt_hist Source code
group_bymassdefect_old Source code
group_bymzisotopes Source code
group_bymzisotopes1 Source code
group_bymzisotopes3 Source code
group_metabs_prev Source code
moduleEigengenes2 Source code
multilevelannotation Man page Source code
multilevelannotationstep2 Source code
multilevelannotationstep3 Source code
multilevelannotationstep4 Source code
multilevelannotationstep5 Source code
simpleAnnotation Source code
xMSannotator Man page
xMSannotator_1.1.1-package Man page
jaspershen/MSannotator documentation built on May 17, 2017, 11:49 a.m.