getIdentificationTable: Get identification table from a metIdentifyClass object

In jaspershen/metID: Metabolite identification based on MS1 and MS2 spectra

Get identification table from a metIdentifyClass object

Description

Get identification table from a metIdentifyClass object. \lifecycledeprecated

Usage

getIdentificationTable(..., candidate.num = 3, type = c("old", "new"))

Arguments

...	One or multiple metIdentifyClass objects.
candidate.num	The number of candidates.
type	The type of identification table.

Value

A identification table (data.frame).

Author(s)

Xiaotao Shen [e-mail]

See Also

The example and demo data of this function can be found https://jaspershen.github.io/metID/articles/metID.html

Examples

data("annotate_result", package = "metID")
annotation_table <- 
getIdentificationTable(annotate_result, candidate.num = 3, type = "old")
annotation_table
annotation_table <- 
getIdentificationTable(annotate_result, candidate.num = 3, type = "new")
annotation_table

jaspershen/metID documentation built on July 31, 2022, 11:31 p.m.