mzIdentifyParam: Generate the mzIdentify parameter list

View source: R/deprecated_metIdentify4all.R

mzIdentifyParamR Documentation

Generate the mzIdentify parameter list

Description

Generate the mzIdentify parameter list. \lifecycledeprecated

Usage

mzIdentifyParam(
  ms1.match.ppm = 25,
  polarity = c("positive", "negative"),
  column = c("rp", "hilic"),
  candidate.num = 1,
  database,
  threads = 3
)

Arguments

ms1.match.ppm

Precursor match ppm tolerance.

polarity

The polarity of data, "positive"or "negative".

column

"hilic" (HILIC column) or "rp" (reverse phase).

candidate.num

The number of candidates.

database

MS1 database name.

threads

Number of threads

Value

A mzIdentifyClass object.

Author(s)

Xiaotao Shen shenxt1990@163.com

See Also

The example and demo data of this function can be found https://jaspershen.github.io/metID/articles/metID.html


jaspershen/metID documentation built on July 31, 2022, 11:31 p.m.