get_iden_info: Get identification information from a metIdentifyClass object

In jaspershen/metID: Metabolite identification based on MS1 and MS2 spectra

Get identification information from a metIdentifyClass object

Description

Get identification information from a metIdentifyClass object. \lifecyclematuring

Usage

get_iden_info(object, which.peak, database)

Arguments

object	A metIdentifyClass object.
which.peak	A peak name or "all". "all" means all peaks with identifications will be output.
database	Database used.

Value

A identification table (data.frame).

Author(s)

Xiaotao Shen [e-mail]

See Also

The example and demo data of this function can be found https://jaspershen.github.io/metID/articles/metID.html

Examples

data("annotate_result", package = "metID")
data("msDatabase_hilic0.0.2", package = "metID")
peak_name <- which_has_identification(annotate_result)
get_iden_info(annotate_result, peak_name[1,1], database = msDatabase_rplc0.0.2)

jaspershen/metID documentation built on July 31, 2022, 11:31 p.m.