View source: R/full_process_fx.R
This function will use the simulated metacommunity matrices and format the data into "HMSC" classes
1 2 3 4 5 6 7 8 9 10 | metacom_as_HMSCdata(
metacomData,
numClusters,
E,
MEMsel,
hmscPars = NULL,
makeRDS = FALSE,
whereToSave = NULL,
objName = NULL
)
|
metacomData |
list of simulated metacommunity matrices. Output from metacom_sim4HMSC() or metacom_sim4HMSC_multiparam() |
numClusters |
number of clusters based on number of cores available to work with DoParallel |
E |
matrix of environmental variables associated to each site |
MEMsel |
distance-based Moran' Eigenvector Map's eigenvector maps from a geographic distance matrix (xy matrix). This comes from adespatial::dbmem() |
hmscPars |
list of parameters to be included for iterations, burn and thin components of the as.HMSCdata() |
makeRDS |
should the function make an RDS file from the output and save it? Default is FALSE |
whereToSave |
file path for the RDS file to be saved in |
objName |
should the RDS file be saved, what should it be called? |
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