Description Usage Arguments Value
Takes a table of features and filters for such that they are present in at least X samples with at least a total of Y reads
1 | Confidence.Filter(FEATURES, MINSAMPS, MINREADS, VERBOSE)
|
FEATURES |
Table of feature/OTU/SV counts where Samples are columns, and feature IDs are row names |
MINSAMPS |
A minimum number of samples for the feature/OTU/SV to be observed in |
MINREADS |
A minimum number of reads for a feature/OTUs/SV to be kept across all samples |
VERBOSE |
Should summary be printed? (T/F) |
filtered feature table
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