find_segments: Use variance of smoothed permutation test statistics to...
In jean997/fret: Association testing with spatially structured phenotypes
Description
Usage
Arguments
Value
Description
Use variance of smoothed permutation test statistics to define interval endpoints.
Intervals are placed so that high variance regions are separated from each other and from low variance
regions.
Usage
1
find_segments(vv, pos, min_length, q = 0.05)
Arguments
vv
Variance of smoothed permutation test statistics
pos
Position vector. Should be the same length as vv
min_length
Minimum interval length
q
Quantile for upper limit for definition of high variance region.
Value
2 by K matrix listing interval endpoints.
jean997/fret documentation built on May 18, 2019, 11:43 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Use variance of smoothed permutation test statistics to define interval endpoints. Intervals are placed so that high variance regions are separated from each other and from low variance regions.
Usage
1 | find_segments(vv, pos, min_length, q = 0.05)
|
Arguments
vv |
Variance of smoothed permutation test statistics |
pos |
Position vector. Should be the same length as vv |
min_length |
Minimum interval length |
q |
Quantile for upper limit for definition of high variance region. |
Value
2 by K matrix listing interval endpoints.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.