Description Usage Arguments Details Value

Plot qq-plot from p-values with shading

1 2 |

`pvals` |
vector of p-values |

`thin` |
Vector of two thinning parameters. The first should be between 0 and 1. The second should be an integer. If thin = c(q, c) then, from the least significant q proportion of pvalues, we will plot only a randomly selected c. This prevents the plot from being huge. |

`shade` |
If true, include 95% confidence bounds. |

`truncate` |
If truncate = t, then p-values with -log10(p-val) > t will be plotted as triangles at t. Defaults to Inf. |

`group` |
Optionally provide a vector of group labels. |

Uses working model 4 described here: https://jean997.github.io/sh2Ash/mh_test.html

A ggplot object

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