catmaid_get_connectors: Return skeleton ids for pre/postsynaptic partners of a set of...

In jefferis/rcatmaid: R access to the API for the CATMAID web image annotation tool

Return skeleton ids for pre/postsynaptic partners of a set of connector_ids

Description

Return skeleton ids for pre/postsynaptic partners of a set of connector_ids

Usage

catmaid_get_connectors(connector_ids, pid = 1, conn = NULL, raw = FALSE, ...)

Arguments

connector_ids	Numeric ids for each connector (synapse).
pid	project id (default 1)
conn	the catmaid_connection object
raw	Whether to return completely unprocessed data (when TRUE) or to convert the nodes and connectors lists into processed data.frames (when FALSE, the default)
...	Additional arguments passed to the catmaid_fetch function.

Details

Note that this returns pairwise connections between neurons. A single synapse (i.e. connector) may have multiple connections; most commonly a single presynaptic cell connects to multiple post-synaptic cells but many variations are possible

Value

A data.frame with columns

• connector_id

• pre

• post

See Also

Other connectors: catmaid_adjacency_matrix(), catmaid_get_connector_table(), catmaid_get_connectors_between(), catmaid_query_connected(), connectors()

jefferis/rcatmaid documentation built on Aug. 16, 2022, 8:52 p.m.