View source: R/catmaid_skeleton.R
catmaid_get_connectors_between | R Documentation |
Return information about connectors joining sets of pre/postsynaptic skids
catmaid_get_connectors_between( pre_skids = NULL, post_skids = NULL, get_names = FALSE, pid = 1, conn = NULL, raw = FALSE, ... )
pre_skids, post_skids |
Skeleton ids in any form understood by
|
get_names |
Whether to fetch the neuron name for each pre- and
post-synaptic skid (default |
pid |
project id (default 1) |
conn |
the |
raw |
Whether to return completely unprocessed data (when |
... |
Additional arguments passed to the |
If either the pre_skids
or post_skids
arguments are
not specified (taking the default NULL
value) then this implies
there is no restriction on the pre- (or post-) synaptic partners.
Each row is a unique set of pre_synaptic node, post_synaptic node, connector_id. A rare (and usually erroneous) scenario is if the same pre_node and post_node are present with two different connector_ids - this would create two rows.
A data.frame with columns
pre_skid
post_skid
connector_id
pre_node_id
post_node_id
connector_x
connector_y
connector_z
pre_node_x
pre_node_y
pre_node_z
post_node_x
post_node_y
post_node_z
pre_confidence
pre_user
post_confidence
post_user
pre_name (optional - the name of the presynaptic neuron)
post_name (optional - the name of the postsynaptic neuron)
Other connectors:
catmaid_adjacency_matrix()
,
catmaid_get_connector_table()
,
catmaid_get_connectors()
,
catmaid_query_connected()
,
connectors()
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