EGQ: Expected Genotype Quality
In jendelman/MapRtools: Tools for genetic mapping
EGQ R Documentation
Expected Genotype Quality
Description
Expected Genotype Quality for Binomial Model
Usage
EGQ(DP, error, prior)
Arguments
DP
read depth
error
allelic error
prior
numeric vector of length ploidy + 1
Details
Expected GQ conditional on the true allele dosage (0,1,2,...ploidy)
Value
numeric vector of length ploidy + 1
jendelman/MapRtools documentation built on April 12, 2025, 12:46 p.m.
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| EGQ | R Documentation |
Expected Genotype Quality
Description
Expected Genotype Quality for Binomial Model
Usage
EGQ(DP, error, prior)
Arguments
DP |
read depth |
error |
allelic error |
prior |
numeric vector of length ploidy + 1 |
Details
Expected GQ conditional on the true allele dosage (0,1,2,...ploidy)
Value
numeric vector of length ploidy + 1
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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