marker.names: Show and change markers names

In jgarces02/FlowCT: A semi-automated workflow for deconvolution of immunophenotypic data and objective reporting on large datasets

Show and change markers names

Description

It shows marker names of a fcs.SCE object and renames them accordin a new vector provided by the user.

Usage

marker.names(fcs.SCE, new.names = NULL)

Arguments

fcs.SCE	A fcs.SCE object generated through FlowCT::fcs.SCE().
new.names	Vector with new channel/marker names (it must has the same length that fcs.SCE's markers). Default = NULL (i.e., markers will not be renamed, only displayed).

Examples

## Not run: 
marker.names(fcs)
new_names <- c("FSC_A", "FSC_H", "SSC_A", "SSC_H", "CD62L", 
     "CXCR3", "CD8", "CCR4", "CCR6", "CD4", "CD45", "CD27")
fcs <- marker.names(fcs, new.names = new_names)

## End(Not run)

jgarces02/FlowCT documentation built on March 28, 2023, 12:42 p.m.