remove.pop: Delete a population from a 'fcs.SCE' object -> DEPRECATED...

In jgarces02/FlowCT: A semi-automated workflow for deconvolution of immunophenotypic data and objective reporting on large datasets

Delete a population from a fcs.SCE object —> DEPRECATED soon! (see updated tutorial)

Description

It removes one or multiple cell populations from a fcs.SCE object.

Usage

remove.pop(fcs.SCE, population, clusters.named)

Arguments

fcs.SCE	A fcs.SCE object generated through FlowCT::fcs.SCE().
population	Name(s) of cell population(s) to be removed.
clusters.named	Column name from the colData(fcs.SCE) object which contains renamed clusters (through FlowCT::clusters.rename()).

Examples

## Not run: 
fcs_rm <- remove.pop(fcs, clusters.named = "SOM_named", 
    population = c("debris", "unclassified"))

## End(Not run)

jgarces02/FlowCT documentation built on March 28, 2023, 12:42 p.m.