Man pages for jipingw/RiboDiPA
Differential pattern analysis for Ribo-seq data
| binTrack | Visualization: generating tracks for 'igvR' (per bin) |
| bpTrack | Visualization: generating tracks for 'igvR' (per bp) |
| data.binned | An example of binned P-sites data |
| DataBinning | Data binning |
| data.psite | An example of P-site coverage data |
| diffPatternTest | Differential pattern analysis of Ribo-seq data |
| diffPatternTestExon | Main function for differential pattern analysis of... |
| exonTrack | Visualization: generating tracks for 'igvR' (per exon) |
| normFactor | Size factors for normalization by sequencing depth |
| plotTest | Plotting ribosome footprint data from mapped P-sites at the... |
| plotTrack | Plotting ribosome footprint data at the mapped P-site level |
| psitecal | P-site position of reads |
| PsiteMapping | P-site mapping |
| result.exon | An example of exon-level differential pattern analysis result |
| result.pst | An example of differential pattern analysis result |
| RiboDiPA | A wrapper function for the RiboDiPA pipeline |
