jipingw/RiboDiPA: Differential pattern analysis for Ribo-seq data

This package performs differential pattern analysis for Ribo-seq data. It identifies genes with significantly different patterns in the ribosome footprint between two conditions. RiboDiPA contains five major components including bam file processing, P-site mapping, data binning, differential pattern analysis and footprint visualization.

Getting started

Package details

Bioconductor views Alignment Coverage DataImport DifferentialExpression GeneExpression GeneRegulation ImmunoOncology Normalization QualityControl RNASeq RiboSeq Sequencing Software
LicenseLGPL (>= 3)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
jipingw/RiboDiPA documentation built on Dec. 21, 2020, 8:20 a.m.