result.exon | R Documentation |
An example output generated by the differential pattern analysis
function diffPatternTestExon
, including counts per exon,
exon-level differential pattern results, etc.
data("result.exon")
A list of 5
A list object of exon-level test results. Each element
of the list is the result from a gene, containing columns: pvalue
,
log2FoldChange
, the adjusted p-value by method "gtxr", and other exon
genomic information.
Gene-level differential pattern results, including T-value, p-value, and q-value
See diffPatternTestExon
Counts per exon, binned from data
, for
the final differential pattern analysis in the format of a list of named
matrices. In each element of the list, rows correspond to replicates,
columns correspond to exons.
The ribosome P-site coverage tracks in the format of a list of named matrices. In each element of the list, rows correspond to replicates, columns correspond to bps.
See diffPatternTestExon
The data was adapted from Kasari et al 2019.
data(result.exon) tracks.exon <- exonTrack(data = result.exon, gene = "YDR050C")
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