An example data set containing 4 ribo-seq replicates of 885
genes, two biological replicates each for wild type cells and
New1 mutant cells, respectively. It is the output of P-site mapping funcion
psiteMapping. It contains the
p-site count at each location of the total transcript within each
A list of size 4
ribosome P-site coverage tracks
ribosome P-site total count, one count per gene
P-site mapping offset rule
relative start and end positions of each exon in the total transcript if a given gene, as well as genomic start and end coordinates
Raw data was adapted from Kasari et al 2019.
data(data.psite) data.binned <- dataBinning(data = data.psite$coverage, bin.width = 0, zero.omit = FALSE, bin.from.5UTR = TRUE, cores = 2)
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