combine_group2_dea: Aggregate 'scalop::dea' output for one group against many in...
In jlaffy/scalop: Single Cell Analysis Operations
View source: R/combine_group2_dea.R
combine_group2_dea R Documentation
Aggregate 'scalop::dea' output for one group against many in turn
Description
Aggregate 'scalop::dea' output for one group against many in turn
Usage
combine_group2_dea(L.dea, coverage = 0.5, return.avg.lfc = FALSE)
Arguments
L.dea
list of gene-named-numeric log2-fold change values
coverage
prioritise genes that appear as DE in at least this fraction of the dea result vectors in 'L.dea'. Default: 0.5
return.avg.lfc
logical; if FALSE (default) return gene names only (ordered by average log2 fold change). If TRUE, return average values. Default: FALSE
jlaffy/scalop documentation built on March 24, 2024, 9 a.m.
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View source: R/combine_group2_dea.R
| combine_group2_dea | R Documentation |
Aggregate 'scalop::dea' output for one group against many in turn
Description
Aggregate 'scalop::dea' output for one group against many in turn
Usage
combine_group2_dea(L.dea, coverage = 0.5, return.avg.lfc = FALSE)
Arguments
L.dea |
list of gene-named-numeric log2-fold change values |
coverage |
prioritise genes that appear as DE in at least this fraction of the dea result vectors in 'L.dea'. Default: 0.5 |
return.avg.lfc |
logical; if FALSE (default) return gene names only (ordered by average log2 fold change). If TRUE, return average values. Default: FALSE |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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