hcutree: Get clusters from hc object by tree heights

In jlaffy/statistrics: Basic Statistics For Single-Cell (or bulk) RNA Analyses

Description

Get clusters from hc object by tree heights

Usage

hcutree(hc, h = hc$height, clean = TRUE, min = 5, max = 0.5, ...)

Arguments

hc	hierarchical clustering obj.
h	cutree arg. height at which to cut. hc$height=all heights.
clean	logical. if TRUE, call to hclean.
min	hclean arg. cluster size. absolute value.
max	hclean arg. cluster size. fraction of total n.
...	other args passed to cutree.

Value

clusters. list of chr vectors.

jlaffy/statistrics documentation built on May 23, 2019, 4:04 a.m.