logTPM: Convert expression data from TPM to logTPM form.
In jlaffy/statistrics: Basic Statistics For Single-Cell (or bulk) RNA Analyses
Description
Usage
Arguments
Value
View source: R/utils-preprocess.R
Description
TPM aka Transcripts Per Million.
If a matrix is provided, logTPM will be applied over each cell and returned as a matrix.
Note. logTPM(tpm) == TPM(logtpm)
Usage
1
Arguments
tpm
a numeric vector. Either a matrix or of length 1.
dividebyten
a boolean. Usually TRUE when single cells expression vals are concerned; usually FALSE when bulk (many cell) expression vals are concerned.
Value
a numeric vector (either a matrix or of length 1) with values converted from TPM to logTPM form.
jlaffy/statistrics documentation built on May 23, 2019, 4:04 a.m.
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Description Usage Arguments Value
View source: R/utils-preprocess.R
Description
TPM aka Transcripts Per Million.
If a matrix is provided, logTPM will be applied over each cell and returned as a matrix.
Note. logTPM(tpm) == TPM(logtpm)
Usage
1 |
Arguments
tpm |
a numeric vector. Either a matrix or of length 1. |
dividebyten |
a boolean. Usually TRUE when single cells expression vals are concerned; usually FALSE when bulk (many cell) expression vals are concerned. |
Value
a numeric vector (either a matrix or of length 1) with values converted from TPM to logTPM form.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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