score: Program Scores

In jlaffy/statistrics: Basic Statistics For Single-Cell (or bulk) RNA Analyses

Description

Program Scores

Usage

score(mat, programs, center = TRUE, center.rowWise = TRUE)

Arguments

mat	a matrix of gene expression data (cells by genes)
programs	either a single or a list of character vectors (genes). Each vector is a program.
center	if TRUE, the resulting score matrix is centered.
center.rowWise	if TRUE, centering will be performed row-wise. Else, centering by column.

Value

list (if many=F) or matrix (if many=T) of program scores

jlaffy/statistrics documentation built on May 23, 2019, 4:04 a.m.