jaccard_filter: Vector Filtering by Jaccard Similarity

In jlaffy/statistrics: Basic Statistics For Single-Cell (or bulk) RNA Analyses

Description

One of two vectors with too high jaccard similarity is removed. Priority is given to groups that appear higher in the list of vectors, such that the lower-placed vector is removed.

Usage

jaccard_filter(x, out = NULL, jac.cut = 0.75)

Arguments

x	list of named vectors. Vectors are assumed to be ordered from most to least significant, such that of two vectors with a similarity score higher than the cut-off, the higher-placed vector will be kept and the lower-placed vector will be thrown.
out	vectors that passed jaccard test.
jac.cut	jaccard value cut off. arg to jaccard.

Value

list of i) x: names of vectors that passed jaccard test and ii) out: vectors that passed jaccard test.

jlaffy/statistrics documentation built on May 23, 2019, 4:04 a.m.