Files in jlmelville/uwot
The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/lint.yaml
.github/workflows/pkgdown.yaml
.github/workflows/rhub.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/RcppExports.R
R/affinity.R
R/bigstatsr_init.R
R/init.R
R/neighbors.R
R/nn_hnsw.R
R/nn_nndescent.R
R/rspectra_init.R
R/supervised.R
R/transform.R
R/umap2.R
R/util.R
R/uwot.R
README.md
_pkgdown.yml
appveyor.yml
codecov.yml
cran-comments.md
inst/include/RcppPerpendicular.h
inst/include/uwot/connected_components.h
inst/include/uwot/coords.h
inst/include/uwot/epoch.h
inst/include/uwot/gradient.h
inst/include/uwot/optimize.h
inst/include/uwot/perplexity.h
inst/include/uwot/sampler.h
inst/include/uwot/smooth_knn.h
inst/include/uwot/supervised.h
inst/include/uwot/tauprng.h
inst/include/uwot/transform.h
inst/include/uwot/update.h
man/figures/mnist-r.png
man/load_uwot.Rd
man/lvish.Rd
man/optimize_graph_layout.Rd
man/save_uwot.Rd
man/similarity_graph.Rd
man/simplicial_set_intersect.Rd
man/simplicial_set_union.Rd
man/tumap.Rd
man/umap.Rd
man/umap2.Rd
man/umap_transform.Rd
man/unload_uwot.Rd
revdep/.gitignore
revdep/email.yml
src/.gitignore
src/Makevars
src/RcppExports.cpp
src/connected_components.cpp
src/nn_parallel.cpp
src/nn_parallel.h
src/perplexity.cpp
src/r_uwot.cpp
src/rng.h
src/rparallel.h
src/rprogress.h
src/smooth_knn.cpp
src/supervised.cpp
src/thread.cpp
src/transform.cpp
tests/testthat.R
tests/testthat/helper_data.R
tests/testthat/helper_fuzzy_sets.R
tests/testthat/test_curve.R
tests/testthat/test_epochs.R
tests/testthat/test_errors.R
tests/testthat/test_fuzzy_simplicial_set.R
tests/testthat/test_knn_aff.R
tests/testthat/test_mixed_distances.R
tests/testthat/test_neighbors.R
tests/testthat/test_normlaplacian.R
tests/testthat/test_optonly.R
tests/testthat/test_output.R
tests/testthat/test_pca.R
tests/testthat/test_perplexity.R
tests/testthat/test_rand_init.R
tests/testthat/test_saveload.R
tests/testthat/test_scale.R
tests/testthat/test_similarity_graph.R
tests/testthat/test_smooth_knn_dists.R
tests/testthat/test_spectral.R
tests/testthat/test_supervised.R
tests/testthat/test_transform.R
vignettes/.gitignore
vignettes/articles/.gitignore
vignettes/articles/abparams.Rmd
vignettes/articles/fast-sgd.Rmd
vignettes/articles/hnsw-umap.Rmd
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vignettes/articles/pacmap-comparison.Rmd
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vignettes/articles/reproducibility.Rmd
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vignettes/articles/sparse-data-example.Rmd
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