FeaturePlotSaveCustomScore: FeaturePlotSaveCustomScore

In jn-goe/gruffi: Gruffi identifies and removes stressed cells from brain organoid single-cell datasets.

FeaturePlotSaveCustomScore

Description

Plot and save a Seurat FeaturePlot with a custom score in the meta data.

Usage

FeaturePlotSaveCustomScore(
  obj = combined.obj,
  genes = "",
  name_desc = NULL,
  h = 7,
  PNG = TRUE,
  ...
)

Arguments

obj	Seurat single cell object, Default: combined.obj
genes	Charcter vector of genes, Default: ""
name_desc	Descriptive name to suffix plot and file name, Default: NULL
h	height, Default: 7
PNG	Save as .png? Default: TRUE
...	Pass any other parameter to the internally called functions (most of them should work).

See Also

FeaturePlot labs ww.FnP_parser save_plot

jn-goe/gruffi documentation built on Nov. 7, 2024, 10:38 p.m.