ParseGruffiGranuleScoreName: Generate Gruffi Granule Score Name

In jn-goe/gruffi: Gruffi identifies and removes stressed cells from brain organoid single-cell datasets.

Generate Gruffi Granule Score Name

Description

This function creates a standardized score name using granule resolution and a Gene Ontology (GO) identifier.

Usage

ParseGruffiGranuleScoreName(
  goID,
  obj = combined.obj,
  granuleRes = GetGruffiClusteringName(obj)
)

Arguments

goID	The Gene Ontology (GO) identifier.
obj	A Seurat object with clustering results in meta.data.
granuleRes	The granule resolution identifier.

Value

A character string representing the standardized score name.

Examples

GetGruffiGranuleScoreName(granuleRes = granule.res.4.gruffi, goID = "GO:0006096")

jn-goe/gruffi documentation built on Nov. 7, 2024, 10:38 p.m.