cr_scatterplot: Scatter plot between methylation and expression in one...

In jokergoo/epik: Integrative Analysis and Visualization of Epigenomic Sequencing Data

Description

Scatter plot between methylation and expression in one correlated region

Usage

cr_scatterplot(cr, expr, gi = NULL, text_column, xlab = "Methylation", ylab = "Expression")

Arguments

cr	correlated regions
expr	the expression matrix which was used in correlated_regions
gi	gene id
text_column	the column name in cr which will be plotted as text annotations.
xlab	xlab in the plot
ylab	ylab in the plot

Details

Scatterplot for all correlated regions corresponding to the gene will be made. If you want to make a subset of correlated regions, directly subset cr.

Internally it uses scatterplot_with_boxplot.

Value

No value is returned

Author(s)

Zuguang Gu <[e-mail]>

Examples

# There is no example
NULL

jokergoo/epik documentation built on Sept. 28, 2019, 9:20 a.m.