guess_ont: Guess the ontology of the input GO IDs
In jokergoo/simplifyGO: Simplify Functional Enrichment Results
View source: R/similarity_GO.R
guess_ont R Documentation
Guess the ontology of the input GO IDs
Description
Guess the ontology of the input GO IDs
Usage
guess_ont(go_id, db = 'org.Hs.eg.db')
Arguments
go_id
A vector of GO IDs.
db
Annotation database. It should be from https://bioconductor.org/packages/3.10/BiocViews.html#___OrgDb. The value can also directly be a OrgDb object.
Details
10 GO IDs are randomly sampled and checked.
Value
A single character scalar of "BP", "CC" or "MF".
If there are more than one ontologies detected. It returns NULL.
Examples
go_id = random_GO(100)
guess_ont(go_id)
jokergoo/simplifyGO documentation built on Oct. 25, 2023, 9:02 p.m.
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View source: R/similarity_GO.R
| guess_ont | R Documentation |
Guess the ontology of the input GO IDs
Description
Guess the ontology of the input GO IDs
Usage
guess_ont(go_id, db = 'org.Hs.eg.db')
Arguments
go_id |
A vector of GO IDs. |
db |
Annotation database. It should be from https://bioconductor.org/packages/3.10/BiocViews.html#___OrgDb. The value can also directly be a |
Details
10 GO IDs are randomly sampled and checked.
Value
A single character scalar of "BP", "CC" or "MF".
If there are more than one ontologies detected. It returns NULL.
Examples
go_id = random_GO(100)
guess_ont(go_id)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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