read.tapestation.csv: Read a TapeStation CSV file

In jwfoley/bioanalyzeR: Analysis of Agilent electrophoresis data

Read a TapeStation CSV file

Description

This function reads a CSV file of electrophoresis data exported from the TapeStation software.

Usage

read.tapestation.csv(csv.file)

Arguments

csv.file

The filename of an electropherogram CSV file exported from the TapeStation software. The file may be compressed with gzip and the filename is expected to end in _Electropherogram.csv or _Electropherogram.csv.gz. The filename can be a remote URL. The electropherogram is expected to be unaligned.

Details

Because the CSV file contains only the raw fluorescence data and not the metadata, this function is less useful by itself than when it is called inside read.tapestation.

Value

A data frame with one row for each reading of each gel lane.

See Also

read.tapestation, read.tapestation.xml

jwfoley/bioanalyzeR documentation built on Aug. 1, 2023, 4:46 a.m.