API for kaiqiong/SOMNiBUS
Smooth modeling of bisulfite sequencing

Global functions
.onAttach Source code
.onLoad Source code
Error Source code
GetFilenameSuffixes Source code
GetLogFile Source code
GetLogLevel Source code
GetTimeStampFormat Source code
Message Source code
PrintLogMessage Source code
RAdat Man page
RAdat2 Man page
SetFilenameSuffixes Source code
SetLogFile Source code
SetLogLevel Source code
SetTimeStampFormat Source code
Warning Source code
binomRegMethModel Man page Source code
binomRegMethModelChecks Source code
binomRegMethModelInit Source code
binomRegMethModelPlot Man page Source code
binomRegMethModelPred Man page Source code
binomRegMethModelPredChecks Source code
binomRegMethModelSim Man page Source code
binomRegMethModelSimChecks Source code
binomRegMethModelSummary Source code
binomRegMethModelUpdate Source code
binomRegMethModelUpdateChecks Source code
binomRegMethPredPlot Man page Source code
estimateBZ Source code
estimateBeta Source code
estimateSE Source code
estimateVar Source code
extractDesignMatrix Source code
fitEM Source code
fitGam Source code
formatFromBSmooth Man page Source code
formatFromBSseq Man page Source code
formatFromBismark Man page Source code
hessianComp Source code
phiFletcher Source code
regResOneSmooth Source code
runSOMNiBUS Man page Source code
splitDataByBed Man page Source code
splitDataByChromatin Man page Source code
splitDataByDensity Man page Source code
splitDataByGRanges Man page Source code
splitDataByGene Man page Source code
splitDataByRegion Man page Source code
kaiqiong/SOMNiBUS documentation built on June 3, 2022, 9:16 a.m.