ravel: Ravel vaginal microbiome data
In katiasmirn/PERFect: Permutation filtration for microbiome data
Description
The vaginal microbiome study of a cohort of 396 reproductive age women previously published in (Ravel et al., 2011),
where data and details on data collection and preprocessing are also available. The goal of the study was to understand
the role and ultimate function of vaginal microbiota in reducing risk of infectious diseases and to identify factors
leading to disease susceptibility. Microbiome data were obtained by pyrosequencing of barcoded 16S rRNA genes;
in this data set 247 taxa were identified.
Usage
1
Format
This file contains the OTU tables in counts and proportion, as well as its metadata. The OTU table has 394 samples
and 247 taxa.
katiasmirn/PERFect documentation built on Sept. 17, 2019, 11:54 a.m.
R Package Documentation
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Description
The vaginal microbiome study of a cohort of 396 reproductive age women previously published in (Ravel et al., 2011), where data and details on data collection and preprocessing are also available. The goal of the study was to understand the role and ultimate function of vaginal microbiota in reducing risk of infectious diseases and to identify factors leading to disease susceptibility. Microbiome data were obtained by pyrosequencing of barcoded 16S rRNA genes; in this data set 247 taxa were identified.
Usage
1 |
Format
This file contains the OTU tables in counts and proportion, as well as its metadata. The OTU table has 394 samples and 247 taxa.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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