API for kdaily/MEMA
Functions to preprocess and normalize MEMA data
| Global functions | |
|---|---|
| CV | Man page Source code |
| addArrayPositionNoRotate | Source code |
| addMedianNormalizedInts | Source code |
| addNormalizedInts | Source code |
| assignEndPoints | Source code |
| autoMMCluster | Man page Source code |
| calcQAScore | Man page Source code |
| calcTheta | Source code |
| calculateZPrime | Source code |
| calculateZPrimeDT | Source code |
| castOnBarcodeWell | Source code |
| cleanColumnNames | Man page Source code |
| coerceAllECM | Man page Source code |
| convertColumnNames | Man page |
| corPlots | Source code |
| extractIntsEndpts | Source code |
| extractNamedValues | Source code |
| extractNormalizedCntrls | Source code |
| filterWCC | Source code |
| findPerimeterCell | Source code |
| kmeansCluster | Man page Source code |
| labelOuterCells | Source code |
| loessModel | Man page Source code |
| melt8Well | Man page Source code |
| meltOnWell | Source code |
| mergeCytoMain | Man page Source code |
| mergeMetadata | Man page Source code |
| mergeSpotMetadata | Man page Source code |
| normProfToCol1 | Man page Source code |
| normWCC | Source code |
| normWellsWithinPlate | Man page Source code |
| numericMedian | Man page Source code |
| optimizeZPrimeFactor | Source code |
| parse4wellvalidationContents | Source code |
| parseBufferWinnerContents | Source code |
| parseCVContents | Source code |
| parseContents | Source code |
| parseSimulatedContents | Source code |
| popDT | Man page |
| positionParms | Man page Source code |
| randomizePositions | Man page Source code |
| readLogData | Man page Source code |
| readMetadata | Man page Source code |
| readSpotMetadata | Man page Source code |
| readSpotMetadataMISVIK | Source code |
| removeColumnNameSpaces | Man page Source code |
| removeNormedColumns | Source code |
| rotateMetadata | Man page Source code |
| spotCellDensities | Man page Source code |
| spotMetadata | Man page |
| summarizeToSpot | Man page Source code |
| wellAN | Man page Source code |
| wellLevelData | Source code |
