API for kdaily/MEMA
Functions to preprocess and normalize MEMA data

Global functions
CV Man page Source code
addArrayPositionNoRotate Source code
addMedianNormalizedInts Source code
addNormalizedInts Source code
assignEndPoints Source code
autoMMCluster Man page Source code
calcQAScore Man page Source code
calcTheta Source code
calculateZPrime Source code
calculateZPrimeDT Source code
castOnBarcodeWell Source code
cleanColumnNames Man page Source code
cleanDT Source code
coerceAllECM Man page Source code
convertColumnNames Man page Source code
corPlots Source code
extractIntsEndpts Source code
extractNamedValues Source code
extractNormalizedCntrls Source code
filterWCC Source code
findPerimeterCell Source code
kmeansCluster Man page Source code
kmeansClusterValue Source code
labelOuterCells Source code
loessModel Man page Source code
melt8Well Man page Source code
meltOnWell Source code
mergeCytoMain Man page Source code
mergeMetadata Man page Source code
mergeSpotMetadata Man page Source code
normProfToCol1 Man page Source code
normWCC Source code
normWellsWithinPlate Man page Source code
numericMedian Man page Source code
optimizeZPrimeFactor Source code
parse4wellvalidationContents Source code
parseBufferWinnerContents Source code
parseCVContents Source code
parseContents Source code
parseSimulatedContents Source code
popDT Man page
positionParms Man page Source code
randomizePositions Man page Source code
readLogData Man page Source code
readMetadata Man page Source code
readSpotMetadata Man page Source code
readSpotMetadataMISVIK Source code
removeColumnNameSpaces Man page Source code
removeNormedColumns Source code
rotateMetadata Man page Source code
spotCellDensities Man page Source code
spotMetadata Man page
summarizeToSpot Man page Source code
wellAN Man page Source code
wellLevelData Source code
kdaily/MEMA documentation built on May 18, 2017, 6:28 p.m.