readSpotMetadata: Read the spot metadata from a gal file
In kdaily/MEMA: Functions to preprocess and normalize MEMA data
Description
Usage
Arguments
Value
View source: R/gal_parse_functions.R
Description
readSpotMetadata returns a dataframe of the contents in a gal file and
adds array indices.
Usage
1
readSpotMetadata(galFile)
Arguments
galFile
the name of a gal file to be read
Value
A dataframe with the contents of each spot in the gal file. The spots
are converted from print block, row and column space to array row and column
space. The array space is aligned with the print space. That is,
the 1,1,1 position in the print space is the first row and first column of the
array space. The Name and ID fields of spots that were not printed have their
dashes replaced with the word blank.
kdaily/MEMA documentation built on May 20, 2019, 8:28 a.m.
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Description Usage Arguments Value
View source: R/gal_parse_functions.R
Description
readSpotMetadata returns a dataframe of the contents in a gal file and
adds array indices.
Usage
1 | readSpotMetadata(galFile)
|
Arguments
galFile |
the name of a gal file to be read |
Value
A dataframe with the contents of each spot in the gal file. The spots are converted from print block, row and column space to array row and column space. The array space is aligned with the print space. That is, the 1,1,1 position in the print space is the first row and first column of the array space. The Name and ID fields of spots that were not printed have their dashes replaced with the word blank.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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