calcQAScore: Calculate a QA score for MEMAs
In kdaily/MEMA: Functions to preprocess and normalize MEMA data
Description
Usage
Arguments
Value
Description
Return a QA score based on the number of spots missing or below a threshold
Usage
1
calcQAScore(DT, threshold, maxNrSpot = 700, value)
Arguments
DT
A datatable with MEMA data
threshold
A numeric vector of length 1
maxNrSpot
A numeric vector of length 1 that is the maximum number of spots printed on the MEMA
value
A character vector of length 1 that is the column name of the values that determine the QA score
Value
A single numeric value that is the proportion of spots below the threshold
kdaily/MEMA documentation built on May 20, 2019, 8:28 a.m.
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Description Usage Arguments Value
Description
Return a QA score based on the number of spots missing or below a threshold
Usage
1 | calcQAScore(DT, threshold, maxNrSpot = 700, value)
|
Arguments
DT |
A datatable with MEMA data |
threshold |
A numeric vector of length 1 |
maxNrSpot |
A numeric vector of length 1 that is the maximum number of spots printed on the MEMA |
value |
A character vector of length 1 that is the column name of the values that determine the QA score |
Value
A single numeric value that is the proportion of spots below the threshold
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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