kmeansCluster: kMeans cluster an intensity value
In kdaily/MEMA: Functions to preprocess and normalize MEMA data

View source: R/derivedParameter_functions.R

Returns cluster assignments for intensity values based on a control ligand

1	kmeansCluster(x, value, ctrlLigand = "HighSerum")

`x`	A dataframe or data.table
`value`	A character vector of one column name in x that conatins non-negative intensity values
`ctrlLigand`	A character vector of one Ligand name in x

Cluster assignments of length nrow(x)for the value column based on a kmeans threshold calculated from the ligand values. The values are 1 for intensities above the threshold and 0 for values equal to or less than the trheshold.

kdaily/MEMA documentation built on May 20, 2019, 8:28 a.m.