make_genomic_annots: Make genomic annotations from a GTF file
In kevinlkx/mapgen: Multi-function software that performs enrichment, functionally-informed genetic fine-mapping and gene mapping
make_genomic_annots R Documentation
Make genomic annotations from a GTF file
Description
Make genomic annotations (genes, exons, introns, UTRs, promoters)
from a GTF file.
Usage
make_genomic_annots(gtf_file, promoter.dist = 2000L)
Arguments
gtf_file
Path to the GTF file
promoter.dist
Bases (default: 2000) upstream of transcription start site as promoter regions
Value
A list of GRanges objects of genomic annotations
kevinlkx/mapgen documentation built on March 31, 2024, 11:03 p.m.
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| make_genomic_annots | R Documentation |
Make genomic annotations from a GTF file
Description
Make genomic annotations (genes, exons, introns, UTRs, promoters) from a GTF file.
Usage
make_genomic_annots(gtf_file, promoter.dist = 2000L)
Arguments
gtf_file |
Path to the GTF file |
promoter.dist |
Bases (default: 2000) upstream of transcription start site as promoter regions |
Value
A list of GRanges objects of genomic annotations
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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