partition_pip_annots: Partition PIPs into functional annotation categories.
In kevinlkx/mapgen: Multi-function software that performs enrichment, functionally-informed genetic fine-mapping and gene mapping
View source: R/partition_pips.R
partition_pip_annots R Documentation
Partition PIPs into functional annotation categories.
Description
Partition PIPs into functional annotation categories.
Usage
partition_pip_annots(finemapstats, annots.list)
Arguments
finemapstats
a GRanges object of fine mapping summary statistics
annots.list
a list of GRanges objects of ordered functional annotation categories,
if a SNP is in multiple annotation categories,
it will be assigned to the first ordered category.
Value
a list with a data frame with the sum of PIPs and
a data frame with the number of SNPs included for each annotation category.
kevinlkx/mapgen documentation built on March 31, 2024, 11:03 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/partition_pips.R
| partition_pip_annots | R Documentation |
Partition PIPs into functional annotation categories.
Description
Partition PIPs into functional annotation categories.
Usage
partition_pip_annots(finemapstats, annots.list)
Arguments
finemapstats |
a GRanges object of fine mapping summary statistics |
annots.list |
a list of GRanges objects of ordered functional annotation categories, if a SNP is in multiple annotation categories, it will be assigned to the first ordered category. |
Value
a list with a data frame with the sum of PIPs and a data frame with the number of SNPs included for each annotation category.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.