kgori/sigfit: Flexible Bayesian inference of mutational signatures

This package implements Bayesian models for fitting and extracting mixtures of mutational signatures from mutation count data. It provides interfaces to a Poisson model and a Dirichlet-Multinomial NMF model, as well as auxiliary functions for analysing and plotting resulting data. Markov Chain Monte Carlo sampling is done using Stan.

Getting started

Package details

LicenseGPL (>=3)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
kgori/sigfit documentation built on Aug. 9, 2019, 3:28 p.m.